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user11532 OP t1_iv06tvl wrote

Any ideas are appreciated. :)

If I understand you correctly, this would be a way to merge the results for smaller parts of an image? Unfortunately, I haven't really managed to achieve any good results on such smaller image parts either. For that reason I haven't tested the merging algorithm presented in the paper, so I don't know how well that one works.

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clementiasparrow t1_iv12zuu wrote

Ok. If you cant annotate, it gets difficult … Maybe stack three depth layers (if there is more than one) and interpret as rgb channels. Then it may be easier to visually track fibers that go in and out.

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