Bioshock, as you mentioned, imagines a city governed by the principles of Objectivism, but also heavily features themes like free will.

Bioshock Infinite has themes of American jingoism, religious revival, and class struggle alongside quantum superposition and multiverse theory (the latter of which is core to the game's narrative and mechanics).

Detroit: Become Human explores concepts like free will, self-determination, and what it means to be alive/sentient.